Results for "Allele"
Blogs
Computer simulation of genetic mechanism !!
...program for detecting recent effective population size reductions from allele data frequencies http://www.e...more flexible and useful settings. If you need models with more than 2 alleles please use the GenomePop pro...3004 days ago
Tools and Method for Haplotype phasing !
..., is best exploited through phased haplotypes, which classify the alleles co-located on the same chrom...ich of the two parental chromosomes, or haplotypes, falls on a specific allele. Fortunately, new advances in...1367 days ago
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Bookmarks
InfoGenomeR: Integrative reconstruction of cancer genome karyotypes
...oint graph to model the connectivity among genomic segments at the genome-wide scale. InfoGenomeR integrates cancer purity and ploidy, total CNAs, allele-specific CNAs, and haplotype...1125 days ago
ConPADE: Genome Assembly Ploidy Estimation from Next-Generation Sequencing Data
ConPADE (Contig Ploidy and Allele Dosage Estimation), a probabilistic method tha...oidy of any given contig/scaffold based on its allele proportions. In the process,...cability of the method for variant calling and allele dosage estimation. Results fo...2656 days ago
- +6 more Bookmarks
Files
Bioinformatics approach to Boar Taint
...the aid of FreeBayes , a variant caller tool. A final list of SNPs was prepared after filtering SNPs on the basis of SNP quality, coverage of SNP allele, functional and structural an...3818 days ago
Pages
Genome Assembly Tools and Software - PART2 !!
...by the Illumina Genome Analyzer ConPADE 1.00 – Contig Ploidy and Allele Dosage EstimationConPADE is a tool used to estimate contig ploidy and allele dosage in polyploid genome as...2714 days ago
Top-level pages
List of generic simulation software/tools/resource with brief description and homepage !!!
...cent effective population size reductions from allele data frequencies http://www.e...settings. If you need models with more than 2 alleles please use the GenomePop pro...r generating haplotype data with pre-specified allele frequencies and LD coefficien...3766 days ago
Commercial and public next-gen-seq (NGS) software
...a analysis. Streamlined analysis workflows for: ChIP-Seq, RNA-Seq, DNA-Seq, DNA Methylation, Gene Expression, Exon, miRNA Expression, Copy Number, Allele-Specific Copy Number, LOH, As...3547 days ago
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Wire posts
News
- ...ne is decider of skin pigmentation variation in South Asia rs1426654-A allele is widely spread throughout t...n, Central Asia and North India but not in South India In European , A-allele is almost reached to fixation...
3855 days ago
Webinar on 'An integrated RNA and DNA approach to unravel genetic regulation in cancer'
...one to investigate the consequences of genomic changes in the RNA transcripts including germline and somatic changes, imprinting, RNA editing and allele specific expression (ASE). In...3400 days ago
Opportunity posts
Research Assistant @ NATIONAL BUREAU OF ANIMAL GENETIC RESOURCES
...Thepost duration is Upto 31st March 2015 or earlier. 2. One post of Senior Research Fellow under NAIP (Component-4) Bioprospecting of genes and allele mining for abiotic stress tol...3835 days ago
Bio-Scripts
- ...from denoised read counts and segmented minor-allele fractions from allelic counts...of denoised and segmented copy-ratio and minor-allele-fraction estimates Postp...each variant locus AnnotateVcfWithExpectedAlleleFraction (Internal) Ann...
2104 days ago
