Comment on "Running Trinity on RNA-seq !"
...nce your assembly is complete, there are several analyses you will likely want to pursue to explore aspect...onfounding aspects to the data, such as outliers or batch effects, you'll want to catch them as early as p...2175 days ago
Comment on "Installing Perl environment on Linux"
...ors/id/Y/YA/YANICK/Parallel-ForkManager-1.19.tar.gz ... OKConfiguring Parallel-ForkManager-1.19 ... OK==> Found dependencies: Test::Warn--> Working on Test::WarnFetching http://www.cpan.org...2178 days ago
2189 days ago
Comment on "Run miniasm assembler on nanopore reads !"
Here’s the quick and dirty of what was done: 1 Run minimap: This uses a pre-built set of defaults (the ava-pb in the code below) for analyzing PacBio data. Minimap...2219 days ago
Comment on "poRe: an R package for the visualization and analysis of nanopore sequencing data"
..."http://www.bioconductor.org/biocLite.R") biocLite("rhdf5") install.packages(c("shiny","bit64","data.table","svDialogs")) q() R may ask if you want to install into a local lib...2226 days ago
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Comment on "Basic command-line to run BLAST"
...(www.genoscope.cns.fr)... 195.83.221.23Connecting to www.genoscope.cns.fr (www.genoscope.cns.fr)|195.83.221.23|:80... connected.HTTP request sent, awaiting response... 200 OKLength...2296 days ago
Comment on "GraphMap - A highly sensitive and accurate mapper for long, error-prone reads"
...from file otherwise. [false] --rebuild-index - Always rebuild index even if it al...STR Additional alignment approaches. Changes the way alignment algorithm is appli...be omitted to obfuscate paths. 2 - umm this one was skipped by accident. The sam...2344 days ago
Comment on "Venn Diagrams on R Studio"
Six-way Venn diagram https://stackoverflow.com/questions/32440128/nice-looking-five-sets-venn-diagrams2370 days ago