Computer simulation of genetic mechanism !!
...program for detecting recent effective population size reductions from allele data frequencies http://www.e...more flexible and useful settings. If you need models with more than 2 alleles please use the GenomePop pro...3029 days ago
Tools and Method for Haplotype phasing !
..., is best exploited through phased haplotypes, which classify the alleles co-located on the same chrom...ich of the two parental chromosomes, or haplotypes, falls on a specific allele. Fortunately, new advances in...1393 days ago
InfoGenomeR: Integrative reconstruction of cancer genome karyotypes
...oint graph to model the connectivity among genomic segments at the genome-wide scale. InfoGenomeR integrates cancer purity and ploidy, total CNAs, allele-specific CNAs, and haplotype...1150 days ago
ConPADE: Genome Assembly Ploidy Estimation from Next-Generation Sequencing Data
ConPADE (Contig Ploidy and Allele Dosage Estimation), a probabilistic method tha...oidy of any given contig/scaffold based on its allele proportions. In the process,...cability of the method for variant calling and allele dosage estimation. Results fo...2681 days ago
Bioinformatics approach to Boar Taint
...the aid of FreeBayes , a variant caller tool. A final list of SNPs was prepared after filtering SNPs on the basis of SNP quality, coverage of SNP allele, functional and structural an...3843 days ago
Genome Assembly Tools and Software - PART2 !!
...by the Illumina Genome Analyzer ConPADE 1.00 – Contig Ploidy and Allele Dosage EstimationConPADE is a tool used to estimate contig ploidy and allele dosage in polyploid genome as...2740 days ago
List of generic simulation software/tools/resource with brief description and homepage !!!
...cent effective population size reductions from allele data frequencies http://www.e...settings. If you need models with more than 2 alleles please use the GenomePop pro...r generating haplotype data with pre-specified allele frequencies and LD coefficien...3791 days ago
Commercial and public next-gen-seq (NGS) software
...a analysis. Streamlined analysis workflows for: ChIP-Seq, RNA-Seq, DNA-Seq, DNA Methylation, Gene Expression, Exon, miRNA Expression, Copy Number, Allele-Specific Copy Number, LOH, As...3573 days ago
3880 days ago
Webinar on 'An integrated RNA and DNA approach to unravel genetic regulation in cancer'
...one to investigate the consequences of genomic changes in the RNA transcripts including germline and somatic changes, imprinting, RNA editing and allele specific expression (ASE). In...3425 days ago
Research Assistant @ NATIONAL BUREAU OF ANIMAL GENETIC RESOURCES
...Thepost duration is Upto 31st March 2015 or earlier. 2. One post of Senior Research Fellow under NAIP (Component-4) Bioprospecting of genes and allele mining for abiotic stress tol...3860 days ago
2129 days ago