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Five unique traits of effective computational biologist
...h perfections. But, they are completely wrong. You should not forget that apart from your computational sk...teract with biotech researchers and learn how do they explain their one graph (which they generally produc...3980 days ago
How to install Perl modules manually, using CPAN command, and other quick ways
...CPAN method.When a Perl module is not installed, application will display the fol...ownload BioPerl in your server/computer. # sudo apt-cache search perl BioPerl O...library for basic sequence manipulation # sudo apt-get install bioperl If it i...3980 days ago
3975 days ago
Best practices in bioinformatics training for life scientists
...y with, bioinformatics tools and resources but also to understand their underlying fundamental theoretical and practical concepts. Find the detail paper at http://bib.oxfordjournal...3947 days ago
Bioinformatics approach to Boar Taint
...00 to >10X average coverage. Short reads generated from these samples mapped to Sus Scrofa ve...in sample population for validation and then used for constructing SNPs haplotypes in close linkage diseq...3819 days ago
Master Thesis: Trans-membrane topology prediction through Markov based decoders
...ce Code: Matlab Conclusion/Implementation: Here discriminant data mining approach was used to predict the...allows us to infer which part of the model architecture are important to capture the information which enc...3974 days ago
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3945 days ago
Bio++ : C Language libraries for your biological need
...Dennis Ritchie writes in his paper, "The Development of the C...opment of large programs. Perhaps most importantly, it support...e computation.Sequence bootstrap.Homogeneity test (Bowker's te...between upper/lower case, etc.Applications: read options from...3977 days ago
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Lateral Gene Transfer Is Enriched in Cancer Samples
There has been always a confusion on cancer and bacteria relationship. This is the first paper which shows lateral gene transfer causes cancer. Find more at http://www.ploscompbiol.org/article/info%3Adoi%2F10.1371%2Fjournal.pcbi.10031073970 days ago
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Bioinformatician become producer/director !!!
...ega. Alignment to hona hi tha. Mera sequence mera base. Markov aapke hai kaun. Algo Banya Apne. MOTIF mil gaya. BLASTana...Haan Maine Bhi ClustalW Kiya Hai GeneScan Karke Dekho Alignment Apna Sequence Parayi *Warning...3948 days ago
Perl Poem: Parse it in both Perl and English!
...as written quite a few Perl poems, as well as a paper on Perl poetry that she pre...etry Meets the Perl Programming Language". (The paper is available as misc/poetry...he Economist and the Guardian: #!/usr/bin/perl APPEAL: listen (please, please)...3948 days ago
Computational Biology in the 21st Century: Making Sense out of Massive Data
...ets will require not only faster computers; it will require smarter algorithms. We show how ideas from cutting-edge algorithms, including spectral graph theory and modern data struc...3932 days ago
University of life sciences UMB - Campus Ås, Norway
Universitetet for miljø- og biovitenskap på Ås3947 days ago
Install BLAST in Ubuntu/Linux and Window !
#On ubuntu sudo apt-get install ncbi-blast+ #Ubuntu Conda installation conda install -c bioconda blast #Windows installation First: Download ftp://ftp.ncbi.nlm.nih...1177 days ago
Retrieve NCBI GenBank records with a range of accession numbers
...warnings; use strict; use Getopt::Long; use LWP::Simple; use URI::Escape; use LWP::UserAgent; use...$param{returnType} = lc( $param{returnType} ); $param{query} = uri_escape( $param{query} ); _doSear...2946 days ago
Which of the following programming language is best for a bioinformatics beginner?
...will like to learn a programming language which is compatible with most bioinformatics tools or software. I basically want to do de-novo assembly, map reads, align reads, and expre...3560 days ago
Which math/statistics programming language/application do you most frequently use in bioinformatics?
I'm doing a bit more statistical analysis on some bioinformatics things lately, and I'm curious if there are any programming languages that are particularly good for this NGS computation. What suggestions do you guys have? Are there any languages that have exceptionally good libraries?3556 days ago
Tryst with a Bioinformatician # Dr Altan Kara
...computational aided-drug design. I applaud Dr Altan for clearly set...to this diversity by using similar approaches. Thus, the employed m...(AKMARK (Project CODE:5153403)) is, applying a bioinformatics-suppor...is work is accessible via http://metapred2cs.ibers.aber.ac.uk/ and f...2392 days ago
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Comment on "Short-read assembly using Spades !"
...s to run SPAdes. This can be done through a command-line interface or a graphical user interface. The comm...ial assembly is not satisfactory, SPAdes allows for an iterative assembly approach where the output from t...445 days ago
445 days ago