3456 days ago
2660 days ago
Painless package development for R
Devtools makes package development a breeze: it works with R’s existing conventions...g a package becomes so easy that it will be your default layout whenever you’re writing a...2964 days ago
Linux command line exercises for NGS data processing
The purpose of this tutorial is to introduce...as well as giving experience in writing one-liners. Copy the requ...d) to the linuxTutorial folder, and do all the processing inside:...s as it is a language in itself and is used more often to manipul...s a program that takes your commands from...2914 days ago
2839 days ago
Entrez Direct: E-utilities on the UNIX Command Line
Entrez Direct (EDirect) is an advanced metho...ions take search terms from command-line arguments. Individual op...-step queries. Record retrieval and formatting normally complete...This can eliminate the need for writing custom software to answer...seamlessly between EDirect commands and U...2795 days ago
2787 days ago
GenomeRing: alignment visualization based on SuperGenome coordinates
The number of completely sequenced genomes is continuously rising,...roviding a visualization that still allows for a quick and comprehensive interpretation...enge. More at https://academic.oup.com/bioinformatics/article/28...2704 days ago
PBSuite: Software for Long-Read Sequencing Data from PacBio
PBJelly - the genome upgrading tool. PBHoney - the structural...BJelly -----Read The Paper http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjo...000 bp). PBHoney considers both intra-read discordance and soft-c...2664 days ago
2658 days ago