Results for "Automatically"
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BLAST Ring Image Generator (BRIG)
...larity between a central reference sequence and other sequences as concentric rings. BRIG will perform all BLAST comparisons and file parsing automatically via a simple GUI. Contig bou...2808 days ago
- ...e more information. There are common options for most BBMap suite programs and depending on the file extension the input/output format is automatically chosen/set. Using BBMap M...
2798 days ago
Many-Core Engine (MCE) for Perl example
...nning. MCE MODELS The models take Many-Core Engine to a new level for ease of use. Two options (chunk_size and max_workers) are configured automatically as well as spawning and shutd...2685 days ago
- ...larity between a central reference sequence and other sequences as concentric rings. BRIG will perform all BLAST comparisons and file parsing automatically via a simple GUI. Contig bou...
2668 days ago
- ...ypes of information: sequence COmposition, CoverAge across multiple samples, CO-alignment to reference genomes and paired-end reads LinkAge to automatically bin contigs into OTUs. Furthe...
2650 days ago
GroopM: Metagenomic binning toolset
GroopM is a metagenomic binning toolset. It leverages spatio-temoraldynamics (differential coverage) to accurately (and almost automatically)extract population genomes from multi-sample...2650 days ago
ChromHMM: Chromatin state discovery and characterization
...ence or absence of each chromatin mark. The resulting model can then be used to systematically annotate a genome in one or more cell types. By automatically computing state enrichments f...2607 days ago
Genome Annotation Transfer Utility (GATU)
...genomes that have already been annotated. For example, whenever a new strain of SARS coronavirus is sequenced, it is possible, using GATU, to automatically annotate the new strain using...2567 days ago
jobTree based python wrapper to run the genome simulation tool suite Evolver
...imulate multi-chromosome genome evolution on an arbitrary phylogeny (Newick format). In addition to simply running evolver, eSC also automatically creates statistical summaries...2373 days ago
- ...Hash. This is then converted to an estimate of sequence identity using the Mash distance. An appropriate k-mer sampling rate is automatically determined given minimum loca...
2369 days ago
