STELLAR: fast and exact local alignments
STELLAR is very practical and fast on very long sequences which makes it a suitable new tool for finding local alignments between genomic sequences under the edit distance model. Binaries are freely available for Linux, Windows, and Mac OS X at http://www.seqan.de/projects/stellar.2105 days ago
NanoPack: visualizing and processing long-read sequencing data
...d at https://github.com/wdecoster/nanopack, together with links to separate scripts and their documentation. The scripts are compatible with Linux, Mac OS and the MS Windows 10 subs...1987 days ago
kallisto: a program for quantifying abundances of transcripts from bulk and single-cell RNA-Seq data
...he need for alignment. On benchmarks with standard RNA-Seq data, kallisto can quantify 30 million human reads in less than 3 minutes on a Mac desktop computer using only t...1974 days ago
GRAbB: Selective Assembly of Genomic Regions, a New Niche for Genomic Research
...documentation at https://github.com/b-brankovics/grabb. GRAbB has been tested on Ubuntu (12.04 and 14.04), Fedora (23), CentOS (7.1.1503) and Mac OS X (10.7). Furthermore, GRA...1955 days ago
VCF2PopTree: a client-side software to construct population phylogeny from genome-wide SNPs
...uter/browser. VCF2PopTree is compatible with all population browsers including Chrome, Opera, Edge and Firefox and works equally efficient in Mac, Windows and Linux (Ubuntu).&...892 days ago