OPERA : Optimal Paired-End Read Assembler
OPERA (Optimal Paired-End Read Assembler) is a sequence assembly program (http://en.wikipedia.org/wiki/Sequence_assembly). It uses information from paired-end/mate-pair/long reads to or...2822 days ago
2822 days ago
2745 days ago
2741 days ago
2732 days ago
2732 days ago
CISA: Contig Integrator for Sequence Assembly
A plethora of algorithmic assemblers have been proposed for the de n...genomes, however, no individual assembler guarantees the optimal assemb...imizing various parameters in an assembler is often performed in order t...employ various state-of-the-art assemblers to generate different sets o...2725 days ago
2721 days ago
2686 days ago
YASRA: Reference based assembler
YASRA (Yet Another Short Read Assembler) performs comparative assembly of short reads using a reference genome, which can differ substantially from the genome being sequenced. Mapping...2649 days ago