Results for "Statistics and Probability"
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One of our primary focuses will be to develop an understanding of the various ways in which we can assign a probability to some chance event....undamental properties of probability, investigate how probability behaves, and learn how to calculate the probabilit...2770 days ago
- PANDASEQ assembles paired-end Illu...on using the complementary strand. When mismatches occur in the...e positions where the forward and reverse primers match best ab...k and overlap to maximise the probability of the forward and re...erver.uwaterloo.ca/~apmasell/pandaseq_man1.html
2696 days ago
FSA: Fast Statistical Alignment
FSA is a probabilistic multiple sequence...ding Methods for Optimization and Control of Multiple Alignment...roblems such as aligning thousands of sequences or megabase-lon...of multiple alignment. This randomized inference can be over t...r is colored according to the probability that it is correctly aligned...2682 days ago
- MaxBin is software for binning assembled metagenomic sequences based o...sembled metagenomic sequences and the reads coverage informatio...in will report genome-related statistics, including estimated completeness, GC content and genome size in the binning su...s as well as MaxBin and Ma...
2654 days ago
gbtools: Interactive Visualization of Metagenome Bins in R
We have developed gbtools, a software package that allows users to visuali...tting coverage (sequencing depth) and GC values of contigs, and also to annotate the plots wi...ed from third-party binning tools and overlaid onto plots, such tha...-by-side. gbtools reports summary statistics...2634 days ago
- UpSetR generates static UpSet plots. The UpSet technique visualiz...ersections in a matrix layout and introduces aggregates based on groupings and queries. The matrix layout en...of elements in the aggregates and intersections, as well as additional summary statistics derived from subset or...
2615 days ago
LIBSVM -- A Library for Support Vector Machines
LIBSVM is an integrated software fo...on (epsilon-SVR, nu-SVR) and distribution estimation (one-...paper:R.-E. Fan, P.-H. Chen, and C.-J. Lin. Working set s...lidation for model selection Probability estimates Various ke...for unbalanced data Both C++ and Java sources GUI demo...2505 days ago
IONiseR: tools for the quality assessment of data produced by Oxford Nanopore’s MinION sequencer
This package is intended to provide tools for the quality assessment of data...ate a number plots for examining the statistics that we think will be..., nanopore sequencing is an emerging and rapidly developing technology...cs that we haven’t thought of, and welcome...2392 days ago
- The guides describe the function, syntax, and typical use-cases of the tools; for a complete list of param...ss Clumpify Dedupe Reformat Repair Seal Split Nextera Statistics Tadpole Taxonomy https://jgi.doe.gov/data-and-tools/b...
2374 days ago
LRCstats: Long Read Correction Statistics
LRCstats is an open-source pipeline for benchmarking DNA long read correction...n algorithms are better than others, and developers of long read corre...een the uncorrected long reads (uLR) and the corresponding sequences i...ing a dynamic programming algorithm. Statistics...2349 days ago
