Results for "IG"
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Kraken: ultrafast metagenomic sequence classification using exact alignments
Kraken is an ultrafast and highly accurate program for assigning taxonomic labels to metagenomic DNA sequences. Previous programs designed for this task have been re...subsets of metagenomic data. Using exact alignment of k-mers, Kraken achiev...2928 days ago
- ...a program for the taxonomic classification of metagenomic high-throughput sequencing reads. Each read is directly assigned to a taxon within the NCBI...es (MEMs), optionally allowing mismatches in the protein alignment. The search can process...
2928 days ago
- ...des access to the 2011 version of the greengenes 16S rRNA gene sequence alignment for browsing, blasting,...phylogenetically specific probes, interpreting microarray results, and aligning/annotating novel sequence...
2926 days ago
- ...earning, computers apply statistical learning techniques to automatically identify patterns in data. These techniques can be used to make highly accurate predictions. Kee...
2923 days ago
- ...release contains 4,433,071 experimentally-derived and 3,605,176 computationally-predicted interactions in 5 organisms. Experimental data cover both high throughput datasets and indi...
2921 days ago
Bioinformatics tools and software
USEARCH >Extreme high-throughput sequence analysis. Order... MUSCLE >Multiple sequence alignment. Faster and more accurat...ing for 16S and other marker genes. Highly accurate OTU sequences and...sp;QSCORE >Compare two multiple alignments for benchmarking. ...2920 days ago
- ...tion for genome scaffolding of pre-assembled contigs using mate-pair data. It als...WiseScaffolder includes 4 subcommands: dumpconfig generates a configuration fil...nd correction of chimerae, the estimation of contigs copy number and produces val...
2912 days ago
- ...(Genome STRucture In Populations) is a suite of tools for discovering and genotyping structural variations using sequencing data. The methods are designed to detect shared variation...
2857 days ago
- ...This README will take you through the steps necessary for running _A5-miseq_. Point to note: There are many situations where A5-miseq is not the right tool for the job. In order...
2876 days ago
- ...nbsp;hg19 (GRCh37), Mouse mm9 (MGSCv37) <> mm10 (GRCm38)). It supports most commonly used file formats including SAM/BAM, Wiggle/BigWig, BED, GFF/GTF, VCF. Cross...
2858 days ago
