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gkno opens the world of complex bioinformatic analysis to people of all level of computational expertise. This site contains documentation, tutorials and information on all the tools that comprise gkno. http://gkno.me/how-to/install.html http://gkno.me/software.html2965 days ago
- Cytoscape is an open source software platform for visualizing complex networks and integrating these with any type of attribute data. A lot of Apps are available for various kinds of problem domains, including bioinformatics, social network analysis, and semantic web.
2963 days ago
Bpipe - a tool for running and managing bioinformatics pipelines
Bpipe provides a platform for running big bioinform...f a series of processing stages - known as 'pipelines'. January 20th, 2016 - New! Bpipe 0.9.9 released! Download lat...en published in Bioinformatics! If you use Bpipe, please cite: Sadedin S, Pop...2964 days ago
Stand-alone programs for Bioinformatician
This directory contains applications for stand-alone use, built specifically for a Linux 64-bit machine. For help on the bigBed and bigWig applications see:http://genome.ucsc.edu/g...2964 days ago
- ClueGO is a Cytoscape plug-in that visualizes the non-redundant biological terms for large clusters of genes in a functionally grouped network and it can be used in combination with GOlorize.
2952 days ago
- ...ase identifiers or annotations. To use db2db select the input type of your data, changing the input type automatically changes the out...be limited to a particular taxon by entering it's Taxon ID. The performance will vary widely dep...
2952 days ago
- ...blished to better understand how sequence variation may affect functional and structural features of nucleosomes. To get started, select a histone type to explore its variants. Mor...
2952 days ago
- ...can deal with base-pair resolution data for 5hmC obtained from Tab-seq or oxBS-seq. It can also handle whole-genome bisulfite sequencing data if proper input format is provided....
2951 days ago
- ...enome assembly data sets as a QC step. This repository accompanies the paper:Blobology: exploring raw gen...2013-10-01 to Frontiers in Bioinformatics and Computational Biology special issue : Quality assessmen...
2941 days ago
- ...is report, or executed individually to generate specific charts and tables. GAEMR...dardizes input by converting a variety of read types to Binary Alignment Map (BAM...f that genome is represented by those pieces. By performing over twenty different...
2940 days ago
