Results for "Sequence Analysis"
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MeGAMerge: A tool to merge assembled contigs, long reads from metagenomic sequencing runs
MeGAMerge MeGAMerge (A tool to merge assembled contigs, long reads from metagenomic sequencing runs) Description MeGAMerge is a perl based wrapper/tool that can accept any number of sequence...2746 days ago
- LAST can: Handle big sequence data, e.g: Compare two vertebrate genomes Ali...bsp;reliability of each aligned column. Use sequence quality data properly....to proteins, with frameshifts. Compare PSSMs to sequence...
2746 days ago
- Motif based sequence analysis suits The MEME Suite allows the...aligned nucleotide or protein sequences, and to perform a wide varie...ME Suite supports motif-based analysis of DNA, RNA and protein sequences. It provides motif...e provides tools for scanning sequences for matches to motifs (FIMO,...
2742 days ago
Prodigal (Prokaryotic Dynamic Programming Genefinding Algorithm)
Prodigal (Prokaryotic Dynamic Programming Genefinding Algorithm) is a micr...: Prodigal can run in metagenomic mode and analyze sequences even when the organism is un...rodigal can be run in one step on a single genomic sequence...2736 days ago
- ...s Grouping large genomic fragments assembled from shotgun metagenomic sequences to deconvolute complex micro...>50% complete with <5% contamination from other species. Further analysis shows that the quality of the...
2669 days ago
- gkno opens the world of complex bioinformatic analysis to people of all level of computational expertise. This site contains documentation, tutorials and information on all the tools that comprise gkno. More at http://gkno.me/
2717 days ago
- A flexible framework for rapid genome analysis and interpretation C Chiang, R M Layer, G G Faust, M R Lindberg, D...rth, A R Quinlan, and I M Hall. SpeedSeq: ultra-fast personal genome analysis and interpretation. Nat Meth...
2714 days ago
- PANDASEQ assembles paired-end Illumina reads into sequences, trying to correct for errors and uncalled ba...inding residues), they can be removed from the sequence during assembly. The final se...bove the threshold and discard the ends of the sequence...
2711 days ago
- Harvest is a suite of core-genome alignment and visualization tools for quickly analyz..., and phylogenetic trees. Tools Parsnp - Core-genome alignment and analysis Gingr - Interactive vis...
2703 days ago
TMAP - torrent mapping alignment program General Notes
...s a fast and accurate alignment software for short and long nucleotide sequences produced by next-generation...t submodule update https://github.com/iontorrent/TS/tree/master/Analysis/TMAP2642 days ago
