Results for "Sequence analysis."
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MeGAMerge: A tool to merge assembled contigs, long reads from metagenomic sequencing runs
MeGAMerge MeGAMerge (A tool to merge assembled contigs, long reads from metagenomic sequencing runs) Description MeGAMerge is a perl based wrapper/tool that can accept any number of sequence...2738 days ago
- LAST can: Handle big sequence data, e.g: Compare two vertebrate genomes Ali...bsp;reliability of each aligned column. Use sequence quality data properly....to proteins, with frameshifts. Compare PSSMs to sequences...
2738 days ago
- Motif based sequence analysis suits The MEME Suite allows the biolog...s of unaligned nucleotide or protein sequences, and to perform a wide varie...sed analysis of DNA, RNA and protein sequences. It provides motif discovery...ME Suite provides tools for scanning sequences...
2734 days ago
Prodigal (Prokaryotic Dynamic Programming Genefinding Algorithm)
Prodigal (Prokaryotic Dynamic Programming Genefinding Algorithm) is a mic...Prodigal can run in metagenomic mode and analyze sequences even when the organism is un...odigal can be run in one step on a single genomic sequence...2728 days ago
- MetaBAT, An Efficient Tool for Accurately Reconstructing Single Genomes from Complex Microbial Communities Grouping large genomic fragments assembled from shotgun metagenomic sequences...
2661 days ago
- gkno opens the world of complex bioinformatic analysis to people of all level of computational expertise. This site contains documentation, tutorials and information on all the tools that comprise gkno. More at http://gkno.me/
2709 days ago
- A flexible framework for rapid genome analysis and interpretation C Chiang, R M Layer, G G Faust, M R Lindberg, D B Rose, E P Garrison, G T Marth, A R Quinlan, and I M...
2706 days ago
- PANDASEQ assembles paired-end Illumina reads into sequences, trying to correct for errors and uncalled ba...inding residues), they can be removed from the sequence during assembly. The final se...bove the threshold and discard the ends of the sequence,...
2703 days ago
- Harvest is a suite of core-genome alignment and visualization tools for quickly analyzing thousands of intraspecific microbial genomes, including variant calls, recombin...
2695 days ago
TMAP - torrent mapping alignment program General Notes
TMAP - torrent mapping alignment program General Notes TMAP is a fast and accurate alignment software for short and long nucleotide sequences...2634 days ago
