Results for "Big Data"
Bookmarks
LAST can: Handle big sequence data, e.g: Compare two vertebrate genomes Align billions of DNA reads... reliability of each aligned column. Use sequence quality data properly. Compare DNA t...2748 days ago
Prodigal (Prokaryotic Dynamic Programming Genefinding Algorithm)
Prodigal (Prokaryotic Dynamic Programming Gene...of every gene in the experimentally verified Ecogene data set (except those containing...th great accuracy (96% of the 5' ends in the Ecogene data set are located correctly)....2739 days ago
Modular, efficient and constant-memory single-cell RNA-seq preprocessing
With kallisto | bustools you can Generate a...velocity and single-nuclei RNA-seq analsis Quantify data from numerous technologies su...chnologies and protocols. Process feature barcoding data such as CITE-seq, REAP-seq, M...1180 days ago
GenomeRing: alignment visualization based on SuperGenome coordinates
The number of completely sequenced genomes is continuous...lp researchers gain new insights into the underlying data. Such visualizations typicall...ation of additional information such as experimental data or annotations. However, prov...2718 days ago
- YAHA, a fast and flexible hash-based aligner. YAHA is as fast and accurate as BWA-S...ility: YAHA is currently supported on 64-bit Linux systems. Binaries and sample data are freely available for down...
2717 days ago
- BioDownloader is a program for downloading...y designed to deal with bioinformatics data files and servers: optimized to work with vast amount of data and very large file sets (~ 1...onization needs, including the Protein Data Bank (PDB) and National Cente...
2680 days ago
Many-Core Engine (MCE) for Perl example
MCE spawns a pool of workers and t...ew process per each element of data. Instead, MCE follows a bank...el. Imagine the line being the data and bank-tellers the parallel...e module. MCE::Queue exchanges data via the core engine to enable...d in 1.506, allows one to pass data from one sub-task into the ne...2706 days ago
iTOL: interactive Tree Of Life
Interactive Tree Of Life is an online tool for the display and manipulatio...n to the precomputed trees, users can upload and display personal trees and data, using the 'Data upload' page or through a per...2706 days ago
DnaSP v5: a software for comprehensive analysis of DNA polymorphism data
DnaSP is a software package for a comprehensive analysis of DNA polymorphism data. Version 5 implements a numbe...ive DNA polymorphism analyses on large datasets. Among other features, th...ds allow for: (i) analyses on multiple data files; (ii) haplotype phasing...2700 days ago
fineSTRUCTURE v2 & GLOBETROTTER
Software available at this site FineSTRUCTURE versi...painter, finestructure and ChromoPainter for RAD tag data used for non-model organisms....important haplotype information from dense genotype data. It describes ancestry in an...2693 days ago
