BIMA V3: an aligner customized for mate pair library sequencing
Summary: Mate pair library sequencing is an effective and economical method for dete...oints within reads increases mapping and alignment complexity. We describe an algorithm that is up to 20 times faster...2756 days ago
2754 days ago
e-RGA: enhanced Reference Guided Assembly of Complex Genomes
Next Generation Sequencing has totally changed genomics: we are able to produce huge amounts of data at a...2751 days ago
2751 days ago
2028 days ago
Prodigal (Prokaryotic Dynamic Programming Genefinding Algorithm)
Prodigal (Prokaryotic Dynamic Programming Genefinding Algorithm) is a microbial (bacterial and archaeal...gene in the experimentally verified Ecogene data s...accuracy (96% of the 5' ends in the Ecogene data set are located correctly). Speci...2741 days ago
Modular, efficient and constant-memory single-cell RNA-seq preprocessing
With kallisto | bustools you can Generate a cell x gene or cel...NA velocity and single-nuclei RNA-seq analsis Quantify data f...technologies and protocols. Process feature barcoding data such...1183 days ago
GenomeRing: alignment visualization based on SuperGenome coordinates
The number of completely sequenced genomes is continuously rising, allowing for comparativ...help researchers gain new insights into the underlying data....egration of additional information such as experimental data or a...2721 days ago
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2716 days ago