Results for "data"
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GenomeRing: alignment visualization based on SuperGenome coordinates
...ner are needed to help researchers gain new insights into the underlying data. Such visualizations typicall...allow for the integration of additional information such as experimental data or annotations. However, prov...2692 days ago
- ...ally excels at complex SVs comprising multiple breakpoints. Availability: YAHA is currently supported on 64-bit Linux systems. Binaries and sample data are freely available for down...
2690 days ago
- ...ecifically designed to deal with bioinformatics data files and servers: optimized to work with vast amount of data and very large file sets (~ 1...le-synchronization needs, including the Protein Data Bank (PDB) and National Cente...
2654 days ago
Many-Core Engine (MCE) for Perl example
...a new process per each element of data. Instead, MCE follows a bank...model. Imagine the line being the data and bank-tellers the parallel...ingle module. MCE::Queue exchanges data via the core engine to enable...duced in 1.506, allows one to pass data from one sub-task into the ne...2679 days ago
iTOL: interactive Tree Of Life
...Of Life, described in Ciccarelli, et al., 2006. In addition to the precomputed trees, users can upload and display personal trees and data, using the 'Data upload' page or through a per...2679 days ago
DnaSP v5: a software for comprehensive analysis of DNA polymorphism data
...or a comprehensive analysis of DNA polymorphism data. Version 5 implements a numbe...ng extensive DNA polymorphism analyses on large datasets. Among other features, th...ted methods allow for: (i) analyses on multiple data files; (ii) haplotype phasing...2673 days ago
fineSTRUCTURE v2 & GLOBETROTTER
...mixture models. RADpainter, finestructure and ChromoPainter for RAD tag data used for non-model organisms....t way of identifying important haplotype information from dense genotype data. It describes ancestry in an...2666 days ago
- ...ncers with sample size of each cancer type being over 200. The resulting data consisting of genetic variant...t manner either from TCGA sources or any in-house studies as long as the data is in MAF format. Maftools ca...
2663 days ago
- ...ween a large number of genomes, with a focus on handling genome assembly data. The application is available...set of complete genomes, draft genomes or even raw, unassembled sequence data. BRIG also accepts SAM-forma...
2663 days ago
- This sockeye software uses the Ensembl database project to import sequence an...import their own custom sequence and annotation data. Individual annotation object...e. By using the Java3D API to visualize genomic data in a 3D environment, we are a...
2662 days ago
