2662 days ago
ConPADE: Genome Assembly Ploidy Estimation from Next-Generation Sequencing Data
...encing. The method can be used for whole genome shotgun (WGS) sequencing data. They also show applicability...ant calling and allele dosage estimation. Results for simulated and real datasets are discussed and provide...2655 days ago
Strand Life Sciences announces the release of Strand NGS v3.1 at ASHG 2017
...(NGS). The first theme is large-scale RNA-Seq data analysis. Current cross-cohor...ds improving the accuracy and efficiency of NGS data analysis. Customers can look...sequence-based diagnostics and clinical genomic data interpretation using a strong...2414 days ago
FinisherSC: a repeat-aware and scalable tool for upgrading de novo assembly using long reads
FinisherSC, a repeat-aware and scalable tool for upgrading de novo assembly using long reads. Experiments with real data suggest that FinisherSC can provide longer and higher quality contigs than existing tools while maintaining high concordance.2652 days ago
PBSuite: Software for Long-Read Sequencing Data from PacBio
PBJelly - the genome upgrading tool. PBHoney - the structural variation discovery tool Both are contained within the PBSuite code found in downloads.----- PB...2652 days ago
2648 days ago
CONCOCT: Clustering cONtigs with COverage and ComposiTion
A program for unsupervised binning of metagenomic contigs by using nucleotide composition, coverage data in multiple samples and linkage data from paired end reads. Warning! This software is to be co...2645 days ago
2636 days ago
Pacbio Long Reads Compatible Software and Tools
...following software packages are known to be compatible with PacBio® data, in addition to PacBio's own...;commercial software. Know of any other open source software for PacBio data? Email us. Software cat...2636 days ago
2629 days ago