Results for "NGS data analysis"
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gkno opens the world of complex bioinformatic analysis to people of all level of computational expertise. This site contains documentation, tutorials and information on all the tools that comprise gkno. More at http://gkno.me/2717 days ago
GenomeRing: alignment visualization based on SuperGenome coordinates
The number of completely sequenced genomes is continuously rising, allowing for compar...p researchers gain new insights into the underlying data. Such visualizations typicall...tion of additional information such as experimental data or...2716 days ago
- YAHA, a fast and flexible hash-based aligner. YAHA is as fast and accurate as BWA-SW...akpoint penalty. YAHA can also report multiple mappings per defined segment of the que...ported on 64-bit Linux systems. Binaries and sample data are...
2714 days ago
- A flexible framework for rapid genome analysis and interpretation C Chiang, R M Layer, G G Faust, M R Lindberg, D...rth, A R Quinlan, and I M Hall. SpeedSeq: ultra-fast personal genome analysis and interpretation. Nat Meth...
2714 days ago
- BioDownloader is a program for downloading and/or updating file...d to work with vast amount of data and very large file sets (~ 1...epository containing the settings for the most common bioinforma...epository containing the settings for common bioinformatics file...needs, including the Protein Data Ban...
2678 days ago
Many-Core Engine (MCE) for Perl example
MCE spawns a pool of workers and therefore does not fork a new process per each element of data. Instead, MCE follows a bank q...el. Imagine the line being the data and bank-tellers the parallel...e module. MCE::Queue exchanges data via the core engine to enable...d in 1.506, allows one to pass data fro...2703 days ago
iTOL: interactive Tree Of Life
Interactive Tree Of Life is an online tool for the display and manipulation of phylogenetic trees. It pr...to the precomputed trees, users can upload and display personal trees and data, using the 'Data upl...2703 days ago
- Harvest is a suite of core-genome alignment and visualization tools for quickly ana...n, and phylogenetic trees. Tools Parsnp - Core-genome alignment and analysis Gingr - Interactive vis...
2703 days ago
TMAP - torrent mapping alignment program General Notes
TMAP - torrent mapping alignment program General Notes TMAP is a fast and accurate...nit git submodule update https://github.com/iontorrent/TS/tree/master/Analysis/TMAP2642 days ago
DnaSP v5: a software for comprehensive analysis of DNA polymorphism data
DnaSP is a software package for a comprehensive analysis of DNA polymorphism data. Version 5 implements a number of new...ive DNA polymorphism analyses on large datasets. Among other features, th...ds allow for: (i) analyses on multiple data files; (ii) haplotype phasing; (i...2697 days ago
