proovread : large-scale high-accuracy PacBio correction through iterative short read consensus
...PacBioToCA/LSC in terms of accuracy and contiguity/sensitivity (http://dx.doi.org/10.1093/bioinformatics/btu392) is easy to install/run/configure supports various types of dat...2370 days ago
2367 days ago
Frontend: Perl Web framework documentation - Andrej Sali Lab
...a set of Perl classes that displays the web interface, allowing a user to upload their input files, start...hen used to display the web pages using a set of CGI scripts that are set up automatically by the build sy...2366 days ago
AliTV—interactive visualization of whole genome comparisons
...ole genome alignments or automatically generates alignments from the provided data. Optional feature annotations and phylo- genetic information are supported. The user-friendly, web...2365 days ago
mojolicious: a next generation web framework for the Perl programming language.
...mework, static file server, CGI/PSGI detection, first class Unicode support and much more for you to...ive, connection pooling, timeout, cookie, multipart and gzip compression support. Built-in non-blocking I...2362 days ago
Dot, an interactive viewer for genome-genome comparison
...enome scientists to visualize genome-genome alignments in order to evaluate new assemblies and perform exploratory comparative genomics. Dot supports the output of MUMmer&rsq...2361 days ago
PGAP-X: Extension on pan-genome analysis pipeline
...genome sight. At the same time, analytical result data from many other programs, including genome alignment result and orthologs clusters, are also supported to be further analyzed...2352 days ago
HTTDB - Horizontally transferred transposable elements database
...further analysed in order to provide a more comprehensive view of such phenomena. Based on these concerns, we developed the HTT database to keep an updated repository of HTT events...2352 days ago
MGcV: the microbial genomic context viewer for comparative genome analysis
MGcV is an interactive web-based visalization tool tailored to facilitate small scale genome analysis. To start using MGcV: Supply your genes/genomic segments/phylogenetic tree o...2346 days ago
2340 days ago