Results for "Ra"
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A probabilistic framework for structural variant discovery. Ryan M Layer, Colby Chiang, Aaron R Quinlan, and Ira M Hall. 2014. "LUMPY: a Probabilistic Framework for Structural Variant Discovery." Genome B...2862 days ago
GeneValidator - Identify problems with predicted genes
...ne predictions and provide useful information extracted from analysing orthologs...abases. The results produced can be used by biocurators and researchers who need...tor in your work, please cite us as follows: Dragan M‡, Moghul MI&Dagge...2861 days ago
- In this exercise, a previously annotated gene will be used to measure the accuracy of different gene finding approaches. GRAIL, GENSCAN, geneid, FGENESH, GenomeScan, GrailEXP and GENEWISE will be us...
2861 days ago
- ...computation pipeline developed and based on programs from four widely used packa...) and KaKs_Calculator (including 10 substitution rate estimation methods). gKaKs...remature stop codons to compute the substitution rates (Ka, Ks and Ka/Ks) between...
2858 days ago
- ...set of tools that would reach state-of-the-art performance across a wide range of species. GeneMark-ET is a gene prediction tool that incorporates RNA-Seq data into unsuperv...
2002 days ago
- ...ssembly of heterozygous genomes.Program takes as input assemble...end and/or mate pairs sequencing libraries and returns sca...assembly, that should be less fragmented and with total&nb...ly scaffolding: joining of genome fragments using paired-end and/or...
2855 days ago
- R-chie allows you to make arc diagrams of RNA secondary structures, allowing for easy comparison and overlap of two structures, rank and display basepairs in co...
2855 days ago
- ...your data format is compatible. Your file must be plain text. Your data values must be non-negative integers. Data must be space-separated (one or more tab or s...
2854 days ago
- ...to cope with large volume of next-generation sequencing (NGS) data. NGS technologies brought a dramatic shift in the world of se...quenced, hundreds of scientists had to raise funds together by writing...ing facilities were significantly constrained from high volume of reque...
2851 days ago
- ...provides a primarily web-based front-end to comparative genome datasets warehouse...arch (TIGR) and development continues at the J. Craig Venter Institute (JCVI) and...a number of research projects that involve comparative genome analysis. The foll...
2849 days ago
