Results for "Genomes Analyses"
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Barrnap: Bacterial ribosomal RNA predictor
Barrnap predicts the location of ribosomal RNA genes in genomes. It supports bacteria (5S,23S,16S), archaea (5S,5.8S,23S,16S), mitochondria (12S,16S) and eukaryotes (5S,5.8S,28S,18S)...2602 days ago
Alignment of closely related whole genomes/scaffolds
With the relative ease and low cost of current generation sequencing technologies has le...to a dramatic increase in the number of sequenced genomes for species across the tree o...in length, to aid in the study of populations, pan-genomes,...3071 days ago
- MAKER is a portable and easily configurable genome annotation pipeline.Its purpose is to allow smaller eukaryotic and prokaryotic genome projects to independently annotate their genomes...
3062 days ago
- Spines Spines is a collection of software tools, developed and used by the...es, alignments, variation etc.), as well as specialized tool sets for various analyses. It also features three seque...
3060 days ago
- Although centromeres are essential for life and are the subject of extensive research, centromere locations in yeast genomes...
3057 days ago
- HiCdat: a fast and easy-to-use Hi-C data analysis tool HiCdat is easy-to-use and provides solutions starting from aligned reads up to in-depth analyses. Importantly, HiCdat is focus...
3057 days ago
Ensembl comparative genomics resources
...analysis of non-vertebrate species by other projects including Ensembl Genomes and Gramene and much of the i...an ideal system to perform and support vertebrate comparative genomic analyses. We use robust software and p...3041 days ago
- LAST can: Handle big sequence data, e.g: Compare two vertebrate genomes Align billions of DNA reads to a genome Indicate the reliability of each aligned column. Use sequence q...
3031 days ago
- DISCOVAR is a new variant caller and DISCOVAR de novo a new genome assembler, both designed for state-of-the-art da...F. DISCOVAR de novo can generate de novo assemblies for both large and small genomes....
2991 days ago
CANU: Assembling Large Genomes with Single-Molecule Sequencing and Locality Sensitive Hashing.
Canu is a fork of the Celera Assembler designed for high-noise single-molecule sequencing (such as the PacBio RSII or Oxford Nanopore MinION). The software is...2966 days ago
