3028 days ago
Ensembl comparative genomics resources
The Ensembl comparative genomics resources are one such reference set that facilitates...different alignment views. The Ensembl comparative genomics infrastructure is extensivel...stem to perform and support vertebrate comparative genomic...3018 days ago
2997 days ago
2958 days ago
MEDEA: Comparative Genomic Visualization with Adobe Flash
As the number of sequence and annotated genomes grows larger, the need to understand, compare, and contrast the data becomes increasingly important. Using the power of t...2960 days ago
Smash: An alignment-free method to find and visualise rearrangements between pairs of DNA sequences
Smash is a completely alignment-free method/tool to find and visualise genomic rearrangements. The detection is based on conditional exclusive compression, namely using a FCM (Markov m...2960 days ago
RASTtk : algorithm for building custom annotation pipelines and annotating batches of genomes
The RAST (Rapid Annotation using Subsystem Technology) annotation engine was built in 20...ering a standard software pipeline for identifying genomic features (i.e., protein-encod...choice of software for identifying and annotating genomic...2960 days ago
YASS :: genomic similarity search tool
YASS is a genomic similarity search tool, for nucleic (DNA/RNA) sequences in fasta or plain text format (it produce...l similarity regions, and then tries to extend them to local alignments. This genomic...2955 days ago
2947 days ago
2944 days ago