Smash: An alignment-free method to find and visualise rearrangements between pairs of DNA sequences
Smash is a completely alignment-free method/tool to find and visualise genomic rearrangements...rge-scale. Nevertheless is more directed to large-scale since that the main aim of the resear...2983 days ago
RASTtk : algorithm for building custom annotation pipelines and annotating batches of genomes
The RAST (Rapid Annotation using Subsystem Technology) annotation engine was built in 2008 to...unctions. Recently, in order to make RAST a more useful resear...ol kit (RASTtk), a modular version of RAST that enables resear...2982 days ago
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SATSUMA : Highly sensitive whole-genome synteny alignments.
Satsuma is a whole-genome synteny alignment program. It takes two genomes, computes alignment...Please feel free to add your own by e-mailing us) is here. If you use Satsuma in your resear...2966 days ago
Hagfish - assess an assembly through creative use of coverage plots
Hagfish is a tool that is to be used in data analysis of Next Generation Sequencing (NGS) exp...builds on the concept of coverage plots and aims to assist (amongst others) in quality contro...2959 days ago
RCircos: an R package for Circos 2D track plots
RCircos package provides a simple and flexible way to make Circos 2D track plots with R and c...ing and graphic manipulation pipelines for presenting large-scale multi-sample genomic resear...2959 days ago
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