Results for "single-cell"

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  • BUSCO: Assessing genome assembly and annotation completeness with Benchmarking Universal Single-Copy Orthologs

    High-throughput genomics has revolutionized biological research, however, while the number of sequenced genomes grows by the day, quality assessment of the resulting as...

    2972 days ago

  • BioDBnet

    Database to Database Conversions db2db allows for conversions of identifiers from one database to other database identifiers or annotations. To use db2db select the inp...

    2949 days ago

  • GAEMR

    The Genome Assembly Evaluation Metrics and Reporting (GAEMR) package is an assembly analysis framework composed a number of integrated modules. T...

    2937 days ago

  • WiseScaffolder

    Function WiseScaffolder is a stand-alone semi-automatic application for genome scaffolding of pre-assembled contigs using mate-pair data. It also produces editable scaff...

    2908 days ago

  • MEGAN6

    Microbiome analysis using a single application MEGAN6 is a comprehensive toolbox for interactively analyzing microbiome data. All the interactive tools you need in one a...

    2896 days ago

  • Genome STRiP

    Genome STRiP (Genome STRucture In Populations) is a suite of tools for discovering and genotyping structural variations using sequencing data. The methods are design...

    2853 days ago

  • R-chie

    R-chie allows you to make arc diagrams of RNA secondary structures, allowing for easy comparison and overlap of two structures, rank and display basepairs in colour...

    2857 days ago

  • Murasaki

    Murasaki is an anchor alignment program that is exteremely fast (17 CPU hours for whole Human x Mouse genome (with 40 nodes: 35 wall minutes), or 8 mammals in 21 CPU h...

    2829 days ago

  • COSMIC

    The accurate description and annotation of structural variants can be complex.  This is due to the different resolution that variants are reported from traditional&n...

    2827 days ago

  • Ribbon !!

    Visualization has played an extremely important role in the current genomic revolution to inspect and understand variants, expression patterns, evolutionary changes, and...

    2808 days ago