2609 days ago
A Post-assembly genome-improvement toolkit (PAGIT) to obtain annotated genomes from contigs
PAGIT addresses the need for software to generate high quality draft genomes. It is based on a series of programs...se gaps left open by the assembler in a draft genome, even when using the same data set...2602 days ago
CABOG: Celera Assembler with Best Overlap Graph
CABOG (Celera Assembler with Best Overlap Graph) is scientific software for DNA research. CABOG has...robes, 2006). Today, CABOG is one of the leading assembly programs for data sets that include paired end data fro...2599 days ago
NCBI Prokaryotic Genome Annotation Pipeline
NCBI Prokaryotic Genome Annotation Pipeline is designed to annotate bacterial and arch...aded version that is capable of processing a larger data volume. You can find a more d...I's annotation pipeline depends on several internal database...2598 days ago
CAR: Reconstructing Contiguous Regions of an Ancestral Genome
We describe a new method for predicting...ine the results from this method with data from chromosome painting expe...f the available human genome sequence data. The precision is further inc...mapping inversions as small as 31 bp. Analysis of the predicted evolutionary...2596 days ago
Artificial Intelligence Material !
Major Machine Learning Types Explianed in 11 Pages Credit: McKinsey For more applied resource you can see at: 1. Data Science Process https://lnkd.in/fMHtxYP 2. Data Vis...1790 days ago
GAM-NGS: genomic assemblies merger for next generation sequencing
GAM-NGS is a tool able to merge two or more assemblies in order to improve contiguity and correctness. It can be used on all NGS-base...2595 days ago
Pollux: platform independent error correction of single and mixed genomes
Pollux: General-purpose error corrector that corrects errors introduced by Illumina, I...ogies and can be applied to single- or mixed-genome data. In addition to correcting su...erage areas of sequencing projects. Using published data set...2595 days ago
2594 days ago
npScarf: Scaffolding and Completing Assemblies in Real-time Fashion
npScarf (jsa.np.npscarf) is a program that scaffolds and completes...n a computing cluster as well as on a laptop computer for microbial datasets. It also facilitates the real-time analysis of positional information suc...2591 days ago