Jabba: Hybrid Error Correction for Long Sequencing Reads
Jabba is a hybrid error correction tool to correct third generation (PacBio / ONT) sequencing data, using second generation (Illumina) data. Input Jabba takes as input...2040 days ago
ECTOOLS: Long Read Correction and other Correction tools
Long Read Correction and other Correction tools This package is a loose collection...input the unitigs from a short read assembly and uses them to correct long read data. More background information...2371 days ago
proovread : large-scale high-accuracy PacBio correction through iterative short read consensus
...formatics/btu392) is easy to install/run/configure supports various types of dat HiSeq/MiSeq (100-500bp) Unitigs 454, ... proovread maps high coverage data to pacbio reads (bwa mem, bla...2371 days ago
Mobyle: a new full web bioinformatics framework
Mobyle, to provide a flexible and usable Web environment for defining and running bioinformatics analyses. It embeds simple yet powerful data management features that allo...2368 days ago
GIGGLE: a search engine for large-scale integrated genome analysis
GIGGLE is a genomics search engine that identifies and ranks the significance of ge...lity of resources such as ENCODE, Roadmap Epigenomics, and GTEx by facilitating data integration and hypothesis ge...2366 days ago
AliTV—interactive visualization of whole genome comparisons
AliTV, which provides interactive visualization of whole...automatically generates alignments from the provided data. Optional feature annotations...rapid exploration and manipulation of the visualized data as well as the export of publ...2366 days ago
2356 days ago
PGAP-X: Extension on pan-genome analysis pipeline
PGAP-X is a microbial comparative genomic analysis platform with graphic interface....nd genetic variation from pan-genome sight. At the same time, analytical result data from many other programs, inc...2352 days ago
karyoploteR: plot whole genomes with arbitrary data
karyoploteR is an R package to create karyoplots, t...is, representations of whole genomes with arbitrary data plotted on them. It is inspir...karyoploteR is to offer the user an easy way to plot data along the genome to get broad...2009 days ago
2343 days ago