Jabba: Hybrid Error Correction for Long Sequencing Reads
Jabba is a hybrid error correction tool to correct third generation (PacBio / ONT) sequencing data, using second generation (Illumina) data....2046 days ago
ECTOOLS: Long Read Correction and other Correction tools
Long Read Correction and other Correction tools This package is a loose collection of scripts. To run the correc...nput the unitigs from a short read assembly and uses them to correct long read data. M...2376 days ago
proovread : large-scale high-accuracy PacBio correction through iterative short read consensus
proovread : large-scale high-accuracy PacBio correction through iterative short read consensus outperforms Pac.../MiSeq (100-500bp) Unitigs 454, ... proovread maps high coverage data to...2376 days ago
2374 days ago
Mobyle: a new full web bioinformatics framework
Mobyle, to provide a flexible and usable Web environment for defining and running bioinformatics analyses. It embeds simple yet powerful data ma...2374 days ago
GIGGLE: a search engine for large-scale integrated genome analysis
GIGGLE is a genomics search engine that identifies and ranks the significance of genomic loci shared between quer...ity of resources such as ENCODE, Roadmap Epigenomics, and GTEx by facilitating data in...2371 days ago
AliTV—interactive visualization of whole genome comparisons
AliTV, which provides interactive visualization of whole genome alignments. AliTV read...utomatically generates alignments from the provided data. Optional feature annotations...apid exploration and manipulation of the visualized data as...2371 days ago
2362 days ago
PGAP-X: Extension on pan-genome analysis pipeline
PGAP-X is a microbial comparative genomic analysis platform with graphic interface. Serials of algorithms and met...d genetic variation from pan-genome sight. At the same time, analytical result data fr...2358 days ago
karyoploteR: plot whole genomes with arbitrary data
karyoploteR is an R package to create karyoplots, that is, representations of whole genomes with arbitrary data plotted on them. It is inspir...aryoploteR is to offer the user an easy way to plot data al...2015 days ago