Platypus – R package for object detection and image segmentation.
platypus is an R package for object detection and semantic segmentation. Currently using platypus you can perform: multi-class semantic segmentatio...1332 days ago
DnaSP: DNA Sequence Polymorphism, is a software package for the analysis of DNA polymorphisms
DnaSP, DNA Sequence Polymorphism, is a software package fo...several loci (a Multiple-MSA data, such as formats generated by some assembler RAD-se..., as well as linkage disequilibrium, recombination, gene flow and gene conversion para...1315 days ago
MAGIC: A tool for predicting transcription factors and cofactors driving gene sets using ENCODE data
...ining Algorithm for GenetIc Controllers (MAGIC), us...hment of TFs and cofactors in gene bodies and flanking regions in...nbsp;binary classification of genes as targets or non-targets. When compared to other TF...ns divided by Immediate Early Gene expression levels. In summa...1315 days ago
Liftoff: An accurate GFF3/GTF lift over pipeline
Liftoff is a tool that accurately maps annotations in GFF...rent coordinate lift-over tools which require a pre-generated “chain” file a...nnotation as input and outputs an annotation of the target genome.1291 days ago
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gggenomes: A grammar of graphics for comparative genomics
gggenomes is a versatile graphics package for comparative genomics. It extends the popular R visualization packageggplot2 by adding dedicated plot functions for genes, syntenic regions, etc. and verbs to manipulate the plot to, for example, quickly zoom in into gene neighborhoods.1247 days ago
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