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DECIPHER is a software toolset that can be used to maintain, analyze, and decipher large amounts of DNA sequence data. To install DECIPHER, see the Downloads page. To...2801 days ago
Nemo – A stochastic, individual-base, genetically explicit simulation platform
A recombination map has been added for all multi-locus traits. The map positions (chromosomal) for neutral markers (e.g. SNPs) and loci under selection (...2800 days ago
- ...del, a deletion of roughly 40Mb on chromosome 11). Syntax is based on HGVS mutation nomenclature recommendations [http://www.hgvs.org/rec.html]. http://cancer.sanger...
2800 days ago
- ...m, ‘GeneBreak’, is implemented in R (www.cran.r-project.org) and is available from Bioconductor (www.bioconductor.org/packages/release/bioc/html/GeneBreak.html).
2181 days ago
- ...p. Reads longer than this will be broken into 6kbp pieces and mapped independently. More at https://www.biostarhandbook.com/tools/bbmap/bbmap-help.html
2792 days ago
- Beagle is a software package that performs genotype calling, genotype phasing, imputation of ungenotyped markers, and identity-by-descent segment detection. Beagle ve...
2774 days ago
- IMPUTE2 is a computer program for phasing observed genotypes and imputing missing genotypes. Most people use just a couple of the program's basic functions, but w...
2774 days ago
- ...t plugins. GoJS normally runs completely in the browser, rendering to an HTML5 Canvas element or SVG withou...nd on any JavaScript libraries or frameworks, so it should work with any HTML or JavaScript framework or wi...
2748 days ago
- ...master31/bamtools) -zlib (http://www.zlib.net/) -(optional but suggested) the jemalloc memory allocator (http://www.canonware.com/jemalloc/download.html)
2733 days ago
- LAST can: Handle big sequence data, e.g: Compare two vertebrate genomes Align billions of DNA reads to a genome Indicate the reliability&nbs...
2721 days ago
