Results for "plant genome"
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Resolving the complexity of the human genome using single-molecule sequencing
The human genome is arguably the most complete mammalian reference...completion. The results in this paper https://www.genomeweb.com/sequencing/team-uses-s...ference suggest a greater complexity of the human genome in the form of variation of l...3275 days ago
- HapSolo, that identifies secondary contigs and defines a primary assembly based on multiple pairwise contig alignment metrics. HapSolo evaluates candidate primary assem...
1147 days ago
Simons Genome Diversity Project
Complete genome sequences from more than one hundred diverse human populations All genomes in the dataset were sequence...minated bias of alleles toward matching the human genome reference sequence, and deter...1147 days ago
Alignment of closely related whole genomes/scaffolds
With the relative ease and low cost of curr...c increase in the number of sequenced genomes for species across the tree...at can quickly compare multiple whole-genome sequences, millions of base p...created to report new tools for whole genome alignments. Please report ne...3073 days ago
- MAKER is a portable and easily configurable genome annotation pipeline.Its purpose is to allow smaller eukaryotic and prokaryotic genome projects to independently annotate their genomes and to create genome databases. MAKER identifies r...
3064 days ago
- Assessing genome assembly and annotation completeness with Benchmarking Universal Single-Copy Orthologs More at http://busco.ezlab.org/
3064 days ago
- RATT is software to transfer annotation from a reference (annotated) genome to an unannotated query genome. It was first developed to tran...
3064 days ago
- Pilon is a software tool which can be used to: Automat...tion Pilon requires as input a FASTA file of the genome along with one or more BAM fi...lysis to identify inconsistencies between the input genome and the evidence in the reads...
3063 days ago
- Tools to create plots showing N-statistics for genome assemblies More at https://github.com/dentearl/n50PlottingTools
3063 days ago
- Convenient conversions between genome assemblie. The liftover package makes it easy to remap genomic coordinates to a different genome assembly. More at https://github.com/aaronwolen/liftover https://www.bioconductor.org/help/workflows/liftOver/
3063 days ago
