GeneProf: analysis of high-throughput sequencing experiment
GeneProf is a web-based, graphical software suite that allows users to anal...f's broad range of analysis modules, which can be combined freely into sophisticated workflows (cp. Concep...ng Data from ..'). GeneProf is academic software developed at th...2556 days ago
Omega2: metagenome assembly pipeline
...m cost flow analysis of the overlap graph and then merged to contigs and scaffolds using mate-pair informa...computing time of existing overlap-layout-consensus assemblers. This indicates Omega can more efficiently...2551 days ago
2551 days ago
Perlbrew: admin-free perl installation management tool.
...cutable should be installed as /usr/bin/perlbrew or /usr/local/bin/perlbrew. For all users...ted. The default perlbrew root directory is ~/perl5/perlbrew, which can be changed by setting P...2549 days ago
CrocoBLAST: Optimized parallel implementation of local sequence alignment algorithms
Local sequence alignment is a cornerstone of bioinformati...de sequences of different pieces of DNA. The Basic Local Alignment Search Tool (BLAST...d. CrocoBLAST combines the accuracy and general applicability of BLAST with computati...2536 days ago
RNAcon: web-server for the prediction and classification of non-coding RNAs
...n is a web-server for the prediction and classification of non-coding RNAs. It us...domForest-based prediction model for the classification of ncRNAs into different...nd Raghava, G.P.S. (2014) Prediction and classification of ncRNAs using structura...2544 days ago
iTOL: Interactive Tree Of Life
...ectly in the browser, and annotate them with various types of data. iTOL can easily visualize trees with 50'000 or more leaves. With advanced search capabilities and display of unro...2543 days ago
Mesquite: A modular system for evolutionary analysis
...emphasis is on phylogenetic analysis, but some of its modules concern population genetics, while others do non-phylogenetic multivariate analysis. Because it is modular, the analyse...2543 days ago
2542 days ago
Mulan: MUltiple sequence Local AligNment and conservation visualization tool
...more) sequence alignments with an efficient and rapid "full local" alignment strategy that ensures a recapitulation of evolutionary seq...r "finished" quality sequences. Mulan provides a dynamic graphical interface to align and visua...2541 days ago