NovelSeq: Novel Sequence Insertion Detection
The NovelSeq framework is designed to detect novel sequence insertions using high throughput paired-end whole genome sequencing data. http://novelseq.sourceforge.net/Home Paper at https://www.ncbi.nlm.nih.gov/pubmed/203857262581 days ago
GraphMap - A highly sensitive and accurate mapper for long, error-prone reads
GraphMap - A highly sensitive and accurate mapper for long, error-prone rea...g position agnostic to alignment parameters. Cons...n across different error profiles, rates and sequencing technologie...p; Various alignment strategies (semiglobal bit-vector...2583 days ago
BEDOPS v2.4.26: high-performance genomic feature operations
BEDOPS v2.4.26 is a suite of tools to address common questions raised in genomic studies — mostly wi.... It aims to be scalable and flexible, facilitating the efficient and accurate analysis and management of...2578 days ago
Genetic-mapper: SVG Genetic Map Drawer
...ic-mapper is a perl script able to draw publication-ready vectorial...tic/linkage map in Scalable Vector Graphics (SVG) format. The result...tion and edited with any vectorial drawing software like Inksca...(LOD score) can be provided. Any extra parameter will be ignored. m...2571 days ago
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DarkHorse: a method for genome-wide prediction of horizontal gene transfer
A new approach to rapid, genome-wide identification and ranking of horizontal transfer candidate proteins is presented. T...tree-building procedures to improve accuracy and efficiency. The method...unavailable. These features are demonstrated in bacterial, archaeal, an...2568 days ago
eQuant : energy-based quality assessment of protein
...these particular protein structures.eQuant is a service for structure quality assessment of single proteins, which utilizes a coarse-grained energy model. The overall quality is calculated as we...2565 days ago
Strand Life Sciences announces the release of Strand NGS v3.1 at ASHG 2017
Strand Life Sciences announces the release of Strand NGS v3.1 at ASHG 2017 ORLA..., RNA-, and small-RNA-Seq. Strand Life Sciences announced the...at-map plots of gene-body coverage; and several other notable...ing towards improving the accuracy and efficiency of NGS data...2445 days ago
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