2552 days ago
CrocoBLAST: Optimized parallel implementation of local sequence alignment algorithms
...commercial bioinformatics packages. However, with the advent of Next Generation Sequencing (NGS) and the development of new sequencing techniques, the utility of traditional BLAST implementations...2537 days ago
RNAcon: web-server for the prediction and classification of non-coding RNAs
...the discrimination between coding and ncRNAs and RandomForest-based prediction mo...ion of ncRNAs into different classes. The structural information based graph prop...tific community. Reference: Panwar, B.; Arora, A. and Raghava, G.P.S. (2014...2545 days ago
iTOL: Interactive Tree Of Life
Interactive Tree Of Life is an online tool for the display, annotation and man...nced search capabilities and display of unrooted, circular and regular cladograms or phylograms, exploring and navigating t...2544 days ago
Mesquite: A modular system for evolutionary analysis
Mesquite is modular, extendible software for evolutionary biology, designed to help biologists organize and analyze comparative data about organisms. Its emphasis is on phylogenetic...2544 days ago
2543 days ago
Mulan: MUltiple sequence Local AligNment and conservation visualization tool
...ms multiple (2 or more) sequence alignments with an efficient and rapid "full local" alignment strategy that ensures a recapitula...mbines refine and tba tools to align either "draft" or "finished" quality sequ...2542 days ago
MGRA: Breakpoint graphs and ancestral genome reconstructions
MGRA (Multiple Genome Rearrangements and Ancestors) is a tool for...nd produces such sequences for ancestral genomes at the internal node...y or partially, in the latter case MGRA can reconstruct conserved anc...e phylogenetic tree based on the rearrangement characters.2537 days ago
Web Apollo: a web-based genomic annotation editing platform
Web Apollo is the first instantaneous, collaborative genomic annotation editor available on the web. One of the natural consequences following from...2534 days ago
2531 days ago