3002 days ago
Trimmomatic: A flexible read trimming tool for Illumina NGS data
Paired End: java -jar trimmomatic-0.35.jar PE -phred33 input_forward.fq.gz input_reverse.fq.gz output_forward_paired.fq.gz output_forward_unpaired.fq.gz output_reverse_...2994 days ago
2990 days ago
2983 days ago
2983 days ago
HOMER: Software for motif discovery and next-gen sequencing analysis
...head first into more advanced analysis tools such as HOMER. Setting...quencing files (your own data or from public sources) Checking s...of large expression datasets (microarray or RNA-Seq) Microarray Basic analysis of Affymetrix Gene Expression...2983 days ago
MEDEA: Comparative Genomic Visualization with Adobe Flash
As the number of sequence and annotated genomes grows larger, the need to understand, compare, and contrast the data becomes increasingly importan...pot outliers is necessary in such large and complex data set...2982 days ago
GATB : Genome Analysis Toolbox with de-Bruijn graph
The Genome Analysis Toolbox with de-Bruijn graph (GATB) provides a set of highly efficient algorithms to analyse NGS data sets. These methods enable the analysis of data sets of any size on multi-core de...2980 days ago
2819 days ago
2968 days ago