eQuant : energy-based quality assessment of protein
Protein structures are of varying quality. Especially, in-silico modeled structur...Quant is a service for structure quality assessment of single pro...the reliability of individual residues. You can submit single PDB fi...2547 days ago
2546 days ago
slacTree: SVG Large Annotated Circular Tree drawing
A simple, extensible, Perl script for producing figures of large phylogenetic trees. While...of circular trees with more than 1000 taxa with custom annotations Because it is a single Perl s...2538 days ago
CrocoBLAST: Optimized parallel implementation of local sequence alignment algorithms
Local sequence alignment is a cornerstone of bioinformatics, allowing to compare the amino-acid sequences of different proteins, or the nucleotide se...2516 days ago
miniasm: very fast OLC-based de novo assembler for noisy long reads
Miniasm is a very fast OLC-based de novo assembler for noisy long reads. It takes al...g, miniasm assembles 9 out of 12 PacBio datasets and 3 out of 4 ONT datasets into a single contig...2391 days ago
INC-Seq: accurate single molecule reads using nanopore sequencing
INC-Seq reads enabled accurate species-level classification, identification of species at 0.1 % abundance and robust quantification of relative abundances, providing a cheap and effective approach for pathogen detection and microbiome profiling on the MinION system.2391 days ago
MinION_GC: An R script to do some QC on MinION data
Other tools focus on getting data out of the fastq or fast5 files, which is slow and computationally intensive. The benefit of this approach is that it works on a single, small...2385 days ago
FOGSAA: Fast Optimal Global Sequence Alignment Algorithm
Sequence alignment algorithms are widely used to infer similarirty and the point of differences between pair of sequ...greedy way taking the symbols from the given pair of sequences (protein or nucleotide) a...2380 days ago
jobTree based python wrapper to run the genome simulation tool suite Evolver
evolverSimControl (eSC) can be used to simulate multi-chromosome genome evolution on an a...a completed simulation and with the help of mafJoin, join them together into a single maf co...2380 days ago
mojolicious: a next generation web framework for the Perl programming language.
Back in the early days of the web, many people learned Perl because of a wonderful Perl librar.... Features An amazing real-time web framework, allowing you to easily grow single file p...2345 days ago