Results for "Plant Bioinformatics"

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  • bipype

    Bipype is a very useful program, which prepare a lot of types of bioinformatics analyses. There are three input options:...

    2740 days ago

  • PRISM

    PRISM is a software for split read (reads which span across a structrual variant -- SV ) mapping and SV calling from the mapping result. PRISM is able to detect small inser...

    2731 days ago

  • E-MEM: Efficient computation of Maximal Exact Matches

    E-MEM is a C++/OpenMP program designed to efficiently compute MEMs between large g...Efficient computation of Maximal Exact Matches for very large genomes, Bioinformatics 31(4) (2015) 509 -- 514....

    2726 days ago

  • MCscan

    MCscan is a computer program that can simultaneously scan multiple genomes to identify homologous chromosomal re...hors. This is the toolset for generating the synteny correspondences in Plant Genome D...

    2719 days ago

  • GenomeRing: alignment visualization based on SuperGenome coordinates

    The number of completely sequenced genomes is continuously rising, allowing for co...highly heterogeneous, remains a challenge. More at https://academic.oup.com/bioinformatics/article/28/12/i7/268598/Genom...

    2692 days ago

  • BioDownloader

    BioDownloader is a program for downloadi...specifically designed to deal with bioinformatics data files and servers: op...g the settings for the most common bioinformatics download needs built-in wiza...containing the settings for common bioinformatics file-synchronization needs, i...

    2653 days ago

  • Perl6

    The official documentation of the Perl 6 programming language is now published! Be...t related Perl 5 language can be found on the Perl 5 documentation website. Bioinformatics Example @ http://examples.per...

    2677 days ago

  • Strand Life Sciences announces the release of Strand NGS v3.1 at ASHG 2017

    Strand Life Sciences announces the release of Strand NGS v3.1 at ASHG 2017 ORLAND...l-RNA-Seq. Strand Life Sciences announced the latest version release of its bioinformatics flagship product, Strand NGS,...

    2414 days ago

  • MaxBin: software for binning assembled metagenomic sequences based on an Expectation-Maximization algorithm.

    MaxBin is software for binning assembled metagenomic sequences based on an Expecta...of each bin after the binning process is finished. https://academic.oup.com/bioinformatics/article/32/4/605/1744462/MaxB...

    2645 days ago

  • Krona

    Krona allows hierarchical data to be explored with zooming, multi-layered pie char...ed using an Excel template or KronaTools, which includes support for several bioinformatics tools and raw data formats. T...

    2629 days ago