LoRDEC: a hybrid error correction program for long, PacBio reads
LoRDEC is a program to correct sequencing errors in long reads from 3rd generation sequencing with high error rate, and is especially intended for PacBio reads. It uses a hyb...2634 days ago
WGS Celera Assembler version 8.3rc2
These are release notes for Celera Assembler version 8.3rc2, which was released on May 24, 201...cificBiosciences/FALCON/tree/v0.1.3 Falcon assembler].Full documentation can be found online...2634 days ago
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ANGES: reconstructing ANcestral GEnomeS maps
This page contains the software ANGES 1.01, that aims at reconstucting ancestral genome maps from homologous markers in extant related genomes. Download Program, version 1.01 (July 10,...2596 days ago
npScarf: Scaffolding and Completing Assemblies in Real-time Fashion
npScarf (jsa.np.npscarf) is a program that scaffolds and completes draft genomes assemblies in real-time with Oxford Nanopore sequencing. The pipeline can run on a computing cluster...2591 days ago
AVID: A Global Alignment Program
A new global alignment method called AVID. The method is de...for the alignment comparisons, as well as the AVID program, are publicly available. See...n for AVID Web address and Web addresses for other programs discussed in this paper.2590 days ago
Grinder / Biogrinder - A versatile omics shotgun and amplicon sequencing read simulator
Grinder is a versatile program to create random shotgun and amplicon sequence libraries based on DNA, RNA or proteic reference sequences provided in a FASTA file. Grinder can pro...2590 days ago
Genome Annotation Transfer Utility (GATU)
Genome Annotation Transfer Utility (GATU) was designed to facilitate quick, efficient...his saves researchers from tedious manual annotation of these sequences. The program utilizes tBLASTn and BLASTn a...2585 days ago
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