ChromHMM: Chromatin state discovery and characterization
ChromHMM is software for learning and characterizing chromatin states. ChromHMM can integrate m...ons that can be directly visualized in a genome browser. ChromHMM software v1.12 (version log) Chr...2601 days ago
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A Post-assembly genome-improvement toolkit (PAGIT) to obtain annotated genomes from contigs
PAGIT addresses the need for software to generate high quality draft genomes. It is based on a series of pro...or an earlier assembly, onto the latest assembly. PAGIT bundles these software and makes them more accessibl...2578 days ago
CABOG: Celera Assembler with Best Overlap Graph
CABOG (Celera Assembler with Best Overlap Graph) is scientific software for DNA research. CABOG...nsion of the Celera Assembler software that was originally developed...g a jigsaw puzzle. The CABOG software was the first to accomplish m...2575 days ago
ANGES: reconstructing ANcestral GEnomeS maps
This page contains the software ANGES 1.01, that aims at reconstucting ancestral genome maps from homologous markers in extant related genomes. Download Program, version 1.01&n...2572 days ago
Pollux: platform independent error correction of single and mixed genomes
Pollux: General-purpose error corrector that corrects errors introduced by Illumina, Ion...show that the quality of assemblies improves when reads are corrected by our software. https://bmcbioinformatics.b...2571 days ago
SuRankCo: supervised ranking of contigs in de novo assemblies
SuRankCo is a machine learning based software to score and rank contigs from de novo assemblies of next generation sequencing data. It trains with alignments of contigs with known referen...2566 days ago
Genetic-mapper: SVG Genetic Map Drawer
Genetic-mapper is a perl script able to draw publication-ready vectorial genetic maps....can either be submitted for publication and edited with any vectorial drawing software like Inkscape and&n...2541 days ago
GeneProf: analysis of high-throughput sequencing experiment
GeneProf is a web-based, graphical software suite that allows users to analyse data prod...ng internet connection -- no need to install software! (cp. Section 'System Re...ir own modules and extend GeneProf. Existing software can be easily wrapped in the...2524 days ago