Linux command line exercises for NGS data processing
...is tutorial is to introduce students to the frequently used tools for NGS analysis as well as giving experi...es as it is a language in itself and is used more often to manipulate NGS data as compared to the other command...2926 days ago
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Kraken: ultrafast metagenomic sequence classification using exact alignments
Kraken is an ultrafast and highly accurate program for assigning taxonomic labels to metagenomic DNA sequences. P...bundance estimation programs, which only classify small subsets of metagenomic data. Us...2921 days ago
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Bioinformatics tools and software
USEARCH >Extreme high-throughput sequence analysis. Orders of magnitude faster than BLAST. MUSCLE >Multipl...Whole-genome alignment. PREFAB >Protein Reference Alignment Database. MSA benchmark collectio...2913 days ago
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