Many-to-many pairwise alignments of two sequence sets
...set of input sequences and compares them all to one or more sequences, writing their optimal global sequence alignments to file. It uses the Needleman-Wunsch alignment algorithm to find t...2191 days ago
3990 days ago
Commercial and public next-gen-seq (NGS) software
...c Research in Maryland, USA. POSIX OS required. Novocraft - Tools for reference alignment of paired-end and single-end Illumina reads. Uses a Needleman-Wunsch algorithm. Can support Bis-Se...3563 days ago
Needleman-Wunsch Algorithm in Perl
...# USAGE: perl nw.pl HEAGAWGHEE PAWHEAE BLOSUM50.txt -8 # See: "Biological sequence anaysis" Durbin et al. ed. CUP 1998, Pg. 19 # Needleman-Wunsch global alignment algo (GOTHO...2950 days ago
Many-to-many pairwise alignments of two sequence sets
needleall reads a set of input sequences and compares them all to one or more sequences, writing their optimal global sequence alignments to file. It uses the Needleman-Wunsch alignment algorithm to find the optimum alignment (including gaps) of two sequences along their entire length. The algori...Tags: Many-to-many, pairwise, alignments, sequence, sets, needleall, Needleman-Wunsch
2191 days ago
Comment on "Bioinformatics Algorithm Demonstrations and Tutorials"
Global sequence alignment using Needleman/Wunsch techniques ... Dynamic Programming http://www.avatar.se/molbioinfo2001/dynprog/dynamic.html3946 days ago