Results for "Original"
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...ioNumbers (the database of key numbers in molecular biology) was created. Along with the numbers, you'll find the relevant references to the original literature, useful comments,...3941 days ago
7th International Conference on Bioinformatics and Computational Biology (BICoB)
...n the fields of bioinformatics and computational biology to present and publish their research results and techniques. The BICoB conference seeks original and high quality papers in th...3532 days ago
- ...Loc modules in seqloc are designed to represent positions and locations (ranges of positions) on sequences, particularly nucleotide sequences. My original motivation for writing these...
3449 days ago
OPERA : Optimal Paired-End Read Assembler
...of scaffolds with the information provided by the paired-end/mate-pair/long reads (for further details see Gao et al, 2011). Note that since the original publication, we have made sig...2828 days ago
- ...inter-chromosome trans-location events. PRISM and PRISM_CTX were originally designed and written by Michael Brudno and Yue Jiang, The original PRISM publication can be foun...
2736 days ago
A Post-assembly genome-improvement toolkit (PAGIT) to obtain annotated genomes from contigs
...g mate pair information. It is able to close gaps left open by the assembler in a draft genome, even when using the same data sets as used by the original assembler. iCORN, that enabl...2583 days ago
GRASS: a generic algorithm for scaffolding next-generation sequencing assemblies.
...optimization problem is solved using an expectation-maximization procedure and an unconstrained binary quadratic programming approximation of the original problem. We compared GRASS wi...2572 days ago
dnaPipeTE: de-novo assembly & annotation Pipeline for Transposable Elements
...Laurent Modolo and the TREEP team of the LBBE: http://lbbe.univ-lyon1.fr/-Equipe-Elements-transposables-.html?lang=en You can find the original publication in GBE here: ...2379 days ago
G-compass: a comparative genome browser
...compass/) is a comparative genome browser. It visualizes evolutionarily conserved genomic regions between human and other 12 vertebrates based on original genome alignments pursuing hi...2248 days ago
HISAT2: a fast and sensitive alignment program for mapping next-generation sequencing reads
...eference genome). Based on an extension of BWT for graphs [Sirén et al. 2014], we designed and implemented a graph FM index (GFM), an original approach and its first implem...2222 days ago
