Results for "Problem"
Bookmarks
Bioinformatician’s Pocket Reference !!
...ppets to build our own custom workflows, and thus keeping syntax at our fingertips has become essential.Although Google is best way to get syntax problem solved, it is not a bad idea...3647 days ago
Rosalind Bioinformatics problems !!!
Rosalind is a platform for learning bioinformatics and programming through problem solving. Take a tour to get the hang of how Rosalind works. http://rosalind.info/problems/list-view/3454 days ago
- ...oject, where they will design and implement a solution to a real-world problem under the guidance of an expe...tational biology and machine learning to tackle the key to drug design problems via MANORAA webserver. http...
1131 days ago
- Cytoscape is an open source software platform for visualizing complex networks and integrating these with any type of attribute data. A lot of Apps are available for various kinds of problem domains, including bioinformatics, social network analysis, and semantic web.
2932 days ago
- ...ntigs often need more context to understand, including alignments and other genomic information from multiple chromosomes. We have addressed this problem by creating Ribbon (genomerib...
2781 days ago
GRASS: a generic algorithm for scaffolding next-generation sequencing assemblies.
...fers a mixed-integer programming formulation of the contig scaffolding problem, which combines contig order,...ntation in a single optimization objective. The resulting optimization problem is solved using an expectatio...2567 days ago
- ...&mdash transcript assembly, abundance estimation and differential expression testing Phylogenetics &mdash The small and large phylogeny problem; parsimony, maximum likelihoo...
2377 days ago
MeDuSa: a multi-draft based scaffolder
...(draft or closed) genomes from related organisms to determine the correct order and orientation of the contigs. MeDuSa formalises the scaffolding problem by means of a combinatorial o...2300 days ago
- The dupRadar package gives an insight into the duplication problem by graphically relating the gene expression level and the duplication rate present on it. Thus, failed experiments can be easily identified at a glance
2310 days ago
repeat-aware: Repeat aware scaffolding evaluation framework by Igor Mandric
Genome scaffolding is a classical challenging problem in bioinformatics. It refers to joining assembly conti...e gap estimate is similar to the true distance on the reference The problem of scaffolding validation is...2265 days ago
