Results for "Wheeler"
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...mino acid sequences, which are then searched in the database using a modified backward search on a memory-efficient implementation of the Burrows-Wheeler transform, which finds maximu...2893 days ago
FMLRC: a long-read error correction tool using the multi-string Burrows Wheeler Transform
FMLRC, or FM-index Long Read Corrector, is a tool for performing hybrid correction of long read sequencing using the BWT and FM-index of short-read sequencing data. Giv...2119 days ago
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Useful Publications and Websites for Deep Sequencing Data Analysis
...e reads in FASTQ format. Deorowicz & Grabowski, Bioinformatics 27(6):860-2, 2011. PubMed Fast and accurate short read alignment with Burrows-Wheeler transform. Li & Durbin, B...3803 days ago
Next generation sequencing in R or bioconductor environment
...ng a universal standard alignment format, and is now supported by a wide variety of alignment tools. Documentation Samtools Website BWA (Burrows-Wheeler Alignment) Website ...3648 days ago
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FMLRC: a long-read error correction tool using the multi-string Burrows Wheeler Transform
FMLRC, or FM-index Long Read Corrector, is a tool for performing hybrid correction of long read sequencing using the BWT and FM-index of short-read sequencing data. Given a BWT of the short-read sequencing data, FMLRC will build an FM-index and use that as an implicit de Bruijn graph. Each long r...Tags: FMLRC, long-read, error, correction, tool, multi-string, Burrows, Wheeler, Transform, nanopore
2119 days ago
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Comment on "Bioinformatics Algorithm Demonstrations and Tutorials"
Burrows Wheeler transform in animation http://www.homolog.us/animation/3627 days ago
Comment on "Commercial and public next-gen-seq (NGS) software"
...cn/SeqMaq: http://biogibbs.stanford.edu/~jiangh/SeqMap/Bowtie: http://bowtie-bio.sourceforge.net/Novoalign: http://www.novocraft.comBWA - Burrows-Wheeler Alignment Tool: http://maq.so...3646 days ago
