Public Databases for Bioinformatics !
...chown /mnt/lab_data/$LAB/ lab accessible data should store lab project data here e.g. ATAC-seq prediction data, enhancer prediction, motif calls /srv/scratch/$USER fast l...1157 days ago
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REAPR: a universal tool for genome assembly evaluation
...r errors in an assembly for manual inspection. It reports mis-assemblies and other warnings, and produces a new broken assembly based on the error calls. The software requires as in...2969 days ago
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SeqMule: Automated human exome/genome variants detection
...the pipeline or fine-tune the parameters by modifying its configuration file. SeqMule also has some built-in functions, such as pooling consensus calls from various callers, plottin...2634 days ago
simNGS and simLibrary – Software for Simulating Next-Gen Sequencing Data
...ine, randomly generates noisy intensities representing the signals for the sequence at each cycle and calculates likelihoods for all possible base calls.2368 days ago
Harvest: a suite of core-genome alignment and visualization tools
...is a suite of core-genome alignment and visualization tools for quickly analyzing thousands of intraspecific microbial genomes, including variant calls, recombination detection, and...2358 days ago