BBTools for bioinformatician !
...u may need to add the flag "-Xmx8g" and increase "max=" to something much higher.Alternatively, if these are assemblies and you're interested in continuity information (L50, N50, etc),...2323 days ago
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1991 days ago
Awesome perl frameworks, libraries and software - PART 2
...ndles in a test environment beppu/pod-server - a web server for locally installed perl documentation -- think gem_server for perl awwaiid/continuity - Stateful Web Apps in P...2546 days ago
Genome Assembly Tools and Software - PART1 !!
...one from ~180 bp fragments, and one from ~3000 bp fragments, both at about 45x coverage. Sequence from longer fragments will enable longer-range continuity. More Tools at http...2738 days ago
Bioinformatics Web Application Development with Perl
...build web sites and web applications of tremendous value with all three. These are neither the only good possibilities (think of POE or Jifty or Continuity or...) nor the only mechanism...2374 days ago
Tags: LTR_retriever, accurately, identifies, annotates, LTR, retrotransposons, LAI, evaluates, continuity, genome, assemblies.
1991 days ago