Results for "flow"
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Flow cytometry is a biophysical laser based ins...re on this: http://bioinformatics.ca/workshops/2013/flow-cytometry-data-analysis-using...tp://pyvideo.org/video/1234/fcm-a-python-library-for-flow-cytometry3916 days ago
- Gene finding in eukaryotic genomes is notoriously difficult to automate. The task is to design a work flow with a minimal set of tools that would reach state-of-the-art performance a...
1975 days ago
VirtualFlow: a versatile, parallel workflow platform for carrying out virtual screening
...Currently, there exist two versions of VirtualFlow, which are tailored to different types of tasks: VFLP: VirtualFlow for Ligand Preparation VFVS&...in the future. https://github.com/VirtualFlow https://www.nature.com/artic...1446 days ago
Many-Core Engine (MCE) for Perl example
...ured automatically as well as spawning and shutdown. MCE::Loop Provides a parallel loop utilizing MCE for building creative loops. MCE::Flow A parallel flow model for building creative a...2675 days ago
Omega2: metagenome assembly pipeline
...e. The overlap graph of reads was simplified by removing transitive edges and trimming short branches. Unitigs were generated based on minimum cost flow analysis of the overlap graph...2515 days ago
StringTie Transcript assembly and quantification for RNA-Seq
StringTie is a fast and highly efficient assembler of RNA-Seq alignments into potential transcripts. It uses a novel network flow algorithm as well as an optional de novo&n...1450 days ago
- ...of the Shasta long read assembler is to rapidly produce accurate assembled sequence using as input DNA reads generated by Oxford Nanopore flow cells. Computational methods...
1597 days ago
DnaSP: DNA Sequence Polymorphism, is a software package for the analysis of DNA polymorphisms
...ns in noncoding, synonymous or nonsynonymous sites, or in various sorts of codon positions), as well as linkage disequilibrium, recombination, gene flow and gene conversion parameter...1280 days ago
RNA-Seq differential expression work flow using DESeq2
One of the aim of RNAseq data analysis is the detection of differentially expressed genes. The package DESeq2 provides methods to test for differential expression analysis.1010 days ago
