Comment on "Indexcov: fast coverage quality control for whole-genome sequencing"
...ded / updated specs: - goleft The following packages will be downloaded: package...----------- Total: 10.4 MB The following NEW packages will be INSTALLED: goleft: 0...roceed ([y]/n)? Y Downloading and Extracting Packagesca-certificates-2018 | 136 KB...2112 days ago
Comment on "Installing Perl environment on Linux"
...rl added / updated specs: - perl - perl-app-cpanminus The following packages will be downloaded: package...------------------------------------ Total: 11.4 MB The following NEW packages will be INSTALLED: libgcc: 7...2162 days ago
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Comment on "poRe: an R package for the visualization and analysis of nanopore sequencing data"
...tall the poRe dependencies in R, which is very easy: R source("http://www.bioconductor.org/biocLite.R") biocLite("rhdf5") install.packages(c("shiny","bit64","data.table...2210 days ago
Comment on "How to install Perl modules on Mac OS X in easy steps !!"
Our Perl script for drawing requires the GD module(2.41 or later version). Moreover, the GD module requires the following packages. The gd graphics library The PNG graphics libraryThe zlib compression library2225 days ago
Comment on "Computer simulation of genetic mechanism !!"
Thanks for such a useful list of tool for simulation studies. I guess you forgot to add RSVSim: an R/Bioconductor package for the simulation of structural variations ( https://www.bioconductor.org/packages/release/bioc/html/RSVSim.html ) in the list.3010 days ago
Comment on "List of popular bioinformatics software/tools"
MEDIPS: genome-wide dierential coverage analysis of sequencing MEDIPS: genome-wide differential coverage analysis of sequencing data derived from DNA enrichment experiments https://www.bioconductor.org/packages/3.3/bioc/vignettes/MEDIPS/inst/doc/MEDIPS.pdf3034 days ago
Comment on "R and Bioconductor Tutorial"
There are several R packages to use image data for statistical analysis and...xen-ebimage-2.pdf http://www.bioconductor.org/packages/release/bioc/html/EBImage.html http://www.bioconductor.org/packages/release/bioc/vignettes/EBImag...3564 days ago
Comment on "Which of the following programming language is best for a bioinformatics beginner?"
...an make a huge difference in computation speed, and hardware requirement. For NGS computations I suggest you to use R, as it has a lot of helpful packages and procedures. Here is manua...3567 days ago
Comment on "Which are the best statistical programming languages to study for a bioinformatician?"
I like the R language. The following table comparing the statistical capabilities of software packages: http://stanfordphd.com/Statistical_Software.html In stastistical language war, a...3588 days ago