Best book Titles for Learning Bionformatics
Nothing can add to our intellect more than reading a book. In...rrent Topics in Computational Molecular Biology (Computational Molecular Biology), Tao Jiang, Yin...Oxford Univ Press Neural Networks and Genome Informatics, Cath...From Bioinformatics Basics to Working Code, Rex A. Dwyer, 2002,...3969 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
Global overview papers Next generation quantitative genetics in...editing in a human transcriptome. Peng et al, Nature Biotechnol...software download Home Page Workspace environments Papers G...sis Toolkit: a MapReduce framework for analyzing next-generatio...gy, University of Maryland - many useful progra...3831 days ago
List of bioinformatics open source projects/software.
...dified or unmodified form) by anyone. Open source software is made by many people, and distributed under licenses that comply w...g the Microsoft 4.0 .NET Framework to help developers, researchers, and...C++ library and framework for molecular modeling and visualization design...3808 days ago
List of generic simulation software/tools/resource with brief description and homepage !!!
List of generic simulation software/...erical simulation program for mode...ymorphism data sets. http://home.uchicago.edu/~rhudson1/source/...ymorphism data sets. http://home.uchicago.edu/~rhudson1/msms A...the Monte Carlo simulation of molecul...long a tree or recombinant network http://biorg...3789 days ago
List of In-silico Binding Site Prediction Tools
Following are the list of In-silico Binding Site Prediction in Protei...el (Richards' surface) and by molecular surface model (Connolly's sur...ed on the outcome of analytic work done using PDBeMotif. fPOP: http:...structure-based drug design. Many computational methods for the predi...3795 days ago
Next generation sequencing in R or bioconductor environment
There are many R software and bioconductor packages for NGS dat...BSgenome packages exist for many common genomes, and can be cr...iform way without the need to know the underlying database sche...dentifies enriched regions by modeling local concentrations of...s", "GenomicFeatures", "BSgenome.Celegans.UCSC....3676 days ago
Commercial and public next-gen-seq (NGS) software
Integrated solutions CLCbio Genomics Workbench - de novo and reference...that extends the CLCbio Main Workbench software. Includes SNP d...stics tool from SAS. They are working with NCGR to refine this t...es the software tool REPuter, but is much more general, with a...anford.edu/~jiangh/SeqMap/) - work li...3570 days ago
Using Interval Trees to Query Genome Annotations by Position
To work on query related to overlapping genomic features: use IntervalTree python pkg http://informatics.malariagen.net/2011/07/07/using-interval-trees-to-query-genome-anno...3601 days ago
Apps for Busy Bioinformatics Researchers !!!
DNAApp: DNAApp: for iPhone/iPad This is an iOS app that allows...r sequencing files. This app works with cloud storage access li...r sequencing files. This app works with cloud storage access li...bMed, Genomic Variations and many other databases to retrieve u...sed to identify all published molecul...3593 days ago
List of Biotechnology Research Laboratory, University, and Centre in India
DEPARTMENT OF BIOTECHNOLOGY Centre For DNA Fingerprinting And Dia...l Drug Research Institute, Lucknow...Centre for Cellular and Molecular Biology Environment P...anga Agricultural University Alagappa University Ala...l Sahni Institute of Palaeobotany, Lucknow &b...2622 days ago