Best book Titles for Learning Bionformatics
Nothing can add to our intellect m...l: A Guide to Common Tools and Databases, Scott Markel, Darryl Le...001, Jones & Bartlett Pub Data Analysis and Classification f...tern Discovery in Biomolecular Data: Tools, Techniques, and Appli...of Gene Expression Microarray Data, T. P. Speed (Editor), 2003,...3960 days ago
Most Commonly used Awk by Bioinformatician
Awk is a programming language that is specifically designed for quickly manipulating space delimited data. Although you can achieve all...3955 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
Global overview papers Next gene...842, 2010. Publisher Website Data quality assessment, filtering...m massively parallel sequence data. Gnerre et al, PNAS 108(4): 1...expressed genes from RNA-seq data. Wang et al., Bioinformatics....toring and searching sequence data in the cloud. OConnor et al,...3822 days ago
List of bioinformatics open source projects/software.
Open source software is software t...t-based workflow framework for data analysis Armadillo workflow...atics platform and graph based database built around most data av...https://github.com/biorails a data management system designed to...exploration of diverse genomic data IntAct http://www.ebi.ac.uk...3799 days ago
List of generic simulation software/tools/resource with brief description and homepage !!!
List of generic simulation softwa...n size reductions from allele data frequencies http://www.ensam....ed model intended to simulate datasets under a very broad range...that simulates sequence-like data over large genomic regions in...osition of typical metagenome data sets http://ab.inf.uni-tuebin...3779 days ago
List of In-silico Binding Site Prediction Tools
Following are the list of In-sili...cket.uchicago.edu/fpop/) is a database of the protein functional...odelling.leeds.ac.uk/sb/ is a database of known ligand binding s...query protein to members of a database of protein 3D structures...ween surfaces from coordinate data supplied in a PDB file. MSPo...3786 days ago
Linux for bioinformatician !!!
Linux, free operating system for computers, provides several powerful admin tools a...to manage your systems effectively and handle huge amount of genomic/biological data with an ease. The field of bi...3748 days ago
Perl one-liner for bioinformatician !!!
With the emergence of NGS technologies, and sequencing data most of the bioinformaticians mung and wrangle around massive amounts of genomics text. There are several "standardized" file formats...3670 days ago
Next generation sequencing in R or bioconductor environment
There are many R software and bioconductor packages for NGS data analysis, some of them are as...nd information and annotation data. Documentation Motif...AM formatted binary alignment data. SAM/BAM is quickly becoming...ing sample code uses the test data set from the above BayesPeak...3667 days ago
Commercial and public next-gen-seq (NGS) software
...Illumina, SOLiD and Roche-FLX data formats and allows the user t...using reads gathered through 454 sequencing technology (GS20 or...er for pyrosequences from the 454 Life Sciences sequencing machi...ser/Alignment Viewer/Assembly Database EagleView - An informatio...3561 days ago