Single Cell RNAseq data analysis tutorial !!
...iorxiv.org/content/early/2016/11/15/087775 Single cell transcriptomes identify human islet cell signatures a...ww.nature.com/nprot/journal/v11/n7/full/nprot.2016.066.html OEFinder: Identify ordering effect genes in sing...2394 days ago
List of visualization tools for network biology
...zy Chemical kinetics stochastic simulation software http://magnet.systemsbiology.net/software/Dizzy/ DyCoNet Gephi plugin that can be used to identify dynamic communities in networ...2332 days ago
Awk for Bioinformatician and computational biologist
...onditional operator in print statement of the form print CONDITION ? PRINT_IF_TRUE_TEXT : PRINT_IF_FALSE_TEXT. For example, in the code below, we identify sequences with lengths > 1...2323 days ago
Tools to Predict the Impact of Missense Variants !
...the functional impact of amino acid substitutions in proteins, such as mutations discovered in cancer or missense polymorphisms” LRT“Identify a subset of deleterious mutat...2247 days ago
Gap filling or Contigs extensions tools !
...he set S of reads those contigs contain. Let C = C0. 2. Repeat: a. Identify paired-end reads (not in C) f...r which one or both ends align within, or extending, contigs in C. b. Identify unpaired reads that align ext...2209 days ago